Alpha-SiO2: Difference between revisions

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''<u>Exercise :</u>'' Determine the <sup>17</sup>O C<sub>q</sub> value and the Si and O schieldings.
''<u>Exercise :</u>'' Determine the <sup>17</sup>O C<sub>q</sub> value and the Si and O schieldings.
alpha-SiO<sub>2</sub> crystallizes in the trigonal P3<sub>1</sub>2 space group.
a = b = 4.604 &Aring;; c = 5.207 &Aring;
&alpha; = &beta; = 90°; &gamma; = 120°
The unit cell contains two independent atoms (1 Si and 1 O)  with 3 formula units (SiO<sub>2</sub>) per unit cell (Z=3). SiO<sub>4</sub> tetrahedron units are linked each others by corner sharing.
In this exercise one wants first to calculate the EFG tensor components of <sup>17</sup>O.
This is very fast task calculated at the end of the first SCF calculation (ground state property).
The experimental values for the Cq is 5.19 MHz. The nuclear quadrupolar momentum used to transform EFG in C<sub>q</sub> is Q = 2.55 10<sup>-30</sup> m<sup>2</sup>
(see the paper of Profeta ''et al.'' (http://pubs.acs.org/doi/abs/10.1021/ja027124r)
(Silicon has a 1/2 nuclear spin, so Q is zero)
In a second step one wants to calculate the shielding parameters for Si and O. This is done using the linear response using the GIPAW formalism.
As the calculation is quite time consuming, only very few k-points and small ENCUT are used with standard PAW data sets.
The calculated shielding tensors components can be compared to the ones obtained by Profeta ''et al.''


*INCAR
*INCAR

Revision as of 18:30, 31 August 2016

Exercise : Determine the 17O Cq value and the Si and O schieldings.

alpha-SiO2 crystallizes in the trigonal P312 space group.

a = b = 4.604 Å; c = 5.207 Å

α = β = 90°; γ = 120°

The unit cell contains two independent atoms (1 Si and 1 O) with 3 formula units (SiO2) per unit cell (Z=3). SiO4 tetrahedron units are linked each others by corner sharing.

In this exercise one wants first to calculate the EFG tensor components of 17O. This is very fast task calculated at the end of the first SCF calculation (ground state property). The experimental values for the Cq is 5.19 MHz. The nuclear quadrupolar momentum used to transform EFG in Cq is Q = 2.55 10-30 m2 (see the paper of Profeta et al. (http://pubs.acs.org/doi/abs/10.1021/ja027124r) (Silicon has a 1/2 nuclear spin, so Q is zero)

In a second step one wants to calculate the shielding parameters for Si and O. This is done using the linear response using the GIPAW formalism. As the calculation is quite time consuming, only very few k-points and small ENCUT are used with standard PAW data sets. The calculated shielding tensors components can be compared to the ones obtained by Profeta et al.

  • INCAR
  SYSTEM      = Si O2

  GGA          = PE
  ISTART       = 1
  ICHARG       = 0
  INIWAV       = 1
  LREAL        =  AUTO
  ISYM         = 2
  ISPIN        = 1

Ionic minimisation
  NSW          = 0
  ISIF         = 2
  IBRION       = 2
#  EDIFFG        = -2E-2
  POTIM        = 0.1

Electronic minimisation
  IALGO        = 38

  LWAVE        = .TRUE.

  EMIN         =   -20.0
  EMAX         =   10.0
  NEDOS        = 1601

EFG Calculation
  LEFG         = .TRUE.
  QUAD_EFG     = 0.0 25.5

Chemical Shift
  PREC         = Normal    # nice
  ENCUT        = 400.0      # typically higher cutoffs than usual are needed
  ISMEAR = 0; SIGMA= 0.1 # no fancy smearings, SIGMA sufficiently small
  EDIFF        = 1E-9      # you'd need much smaller EDIFFs.

  LCHIMAG      = .TRUE.   # to switch on linear response for chemical shifts
  DQ           = 0.001         # often the default is sufficient
  ICHIBARE     = 1       # often the default is sufficient
  LNMR_SYM_RED = .TRUE. # be on the safe side
  NSLPLINE     = .TRUE.  # only needed if LREAL is NOT set.
  LREAL        = A          # helps for speed for large systems, not needed
  NBANDS       = 30       # to safe memory, ??? = NELECT/2 
  • KPOINTS
automatic mesh
0
Auto
20
  • POSCAR
O2 Si1
   1.00000000000000
     4.6040000915999997    0.0000000000000000    0.0000000000000000
    -2.3020000457999998    3.9871810383000001    0.0000000000000000
     0.0000000000000000    0.0000000000000000    5.2069997787000002
   Si   O
     3     6
Direct
  0.4436617824484789 -0.0000000000000000  0.3333333429999996
 -0.0000000000000000  0.4436617824484789  0.6666666870000029
  0.5563382175515210  0.5563382175515210 -0.0000000000000000
  0.3926661416221499  0.3062177364999842  0.2428214976299141
  0.6937822635000156  0.0864484051221655  0.5761548406299137
  0.9135515948778347  0.6073338583778505  0.9094881546299145
  0.3062177364999842  0.3926661416221499  0.7571785323700884
  0.0864484051221655  0.6937822635000156  0.4238451593700863
  0.6073338583778505  0.9135515948778347  0.0905118383700884

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